Data summary of patient p1:
The different tabs below allow to browseTime [days] | RNA templates | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|---|
122 | 33 | ok | ok | ok | ok | ok | ok |
562 | 460 | ok | ok | ok | ok | low | ok |
1084 | 380 | ok | ok | ok | ok | low | ok |
1254 | 730 | ok | ok | ok | ok | low | ok |
1282 | 730 | ok | ok | ok | ok | low | ok |
1393 | 440 | ok | ok | ok | ok | low | ok |
1861 | 650 | ok | ok | ok | ok | low | ok |
2303 | 2 000 | ok | ok | ok | ok | low | ok |
2578 | 19 000 | ok | ok | ok | ok | low | ok |
2639 | 16 000 | ok | ok | ok | ok | low | ok |
2922 | 33 000 | ok | ok | ok | ok | ok | ok |
2966 | 43 000 | ok | ok | ok | ok | ok | ok |
Note: low diversity might be due, in addition to biological reasons, to a low RT-PCR efficiency in a specific amplicon.
These alignments are premade for regions of general interest.
Generate alignments for a custom genomic region.
Sample | years on treatment | good reads | hypermutated |
---|---|---|---|
DNA 1 | 7.9 | reads | reads |
DNA 2 | 9.9 | reads | reads |
DNA 3 | 10.3 | reads | reads |