Data summary of patient p9:
The different tabs below allow to browseTime [days] | RNA templates | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|---|
106 | 150 | ok | ok | ok | ok | ok | ok |
227 | 130 | ok | ok | ok | ok | low | ok |
813 | 67 | ok | ok | ok | ok | low | ok |
1193 | 73 | ok | ok | ok | miss | miss | ok |
1815 | 260 | ok | ok | ok | ok | low | ok |
2214 | 8 000 | ok | ok | ok | ok | ok | ok |
2608 | 1 000 | ok | ok | ok | ok | miss | ok |
2955 | 2 000 | ok | ok | ok | ok | ok | ok |
Note: low diversity might be due, in addition to biological reasons, to a low RT-PCR efficiency in a specific amplicon.
These alignments are premade for regions of general interest.
Generate alignments for a custom genomic region.
Sample | years on treatment | good reads | hypermutated |
---|---|---|---|
DNA 1 | 7.7 | reads | reads |
DNA 2 | 9.7 | reads | reads |
DNA 3 | 10.2 | reads | reads |