Data summary of patient p8:
The different tabs below allow to browseTime [days] | RNA templates | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|---|
87 | 190 | ok | ok | ok | ok | ok | low |
200 | 260 | ok | low | ok | ok | ok | ok |
570 | 830 | ok | ok | ok | ok | ok | ok |
1003 | 2 000 | ok | ok | ok | ok | ok | ok |
1437 | 2 000 | ok | ok | ok | ok | ok | ok |
1810 | 6 000 | ok | ok | low | low | low | ok |
2208 | 35 000 | low | ok | ok | low | ok | ok |
Note: low diversity might be due, in addition to biological reasons, to a low RT-PCR efficiency in a specific amplicon.
These alignments are premade for regions of general interest.
Generate alignments for a custom genomic region.
Sample | years on treatment | good reads | hypermutated |
---|---|---|---|
DNA 1 | 8.3 | reads | reads |
DNA 2 | 10.9 | reads | reads |
DNA 3 | 10.5 | reads | reads |