Data summary of patient p10:
The different tabs below allow to browseTime [days] | RNA templates | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|---|
33 | - | ok | ok | ok | ok | ok | ok |
66 | 40 000 | ok | ok | ok | ok | miss | ok |
68 | 11 000 | low | ok | low | ok | miss | miss |
374 | - | ok | ok | ok | ok | miss | ok |
530 | - | miss | miss | miss | low | miss | miss |
912 | - | low | ok | ok | ok | miss | ok |
1004 | - | low | low | ok | miss | miss | miss |
2229 | 800 | ok | ok | ok | ok | ok | ok |
2256 | 700 | ok | low | ok | ok | miss | low |
Note: low diversity might be due, in addition to biological reasons, to a low RT-PCR efficiency in a specific amplicon.
These alignments are premade for regions of general interest.
Generate alignments for a custom genomic region.
Sample | years on treatment | good reads | hypermutated |
---|---|---|---|
DNA 1 | 16.2 | reads | reads |
DNA 2 | 18.3 | reads | reads |
DNA 3 | 18.6 | reads | reads |