Data summary of patient p5:
The different tabs below allow to browseTime [days] | RNA templates | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|---|
134 | 3 | miss | ok | ok | ok | ok | ok |
303 | 60 | ok | ok | ok | ok | miss | ok |
713 | 93 | ok | ok | ok | ok | low | ok |
1057 | 560 | ok | ok | ok | ok | ok | ok |
1414 | 170 | ok | ok | ok | ok | ok | ok |
1813 | 710 | low | ok | ok | ok | ok | ok |
2149 | 580 | low | ok | ok | ok | ok | ok |
Note: low diversity might be due, in addition to biological reasons, to a low RT-PCR efficiency in a specific amplicon.
These alignments are premade for regions of general interest.
Generate alignments for a custom genomic region.
Sample | years on treatment | good reads | hypermutated |
---|---|---|---|
DNA 1 | 4.0 | reads | reads |
DNA 2 | 6.3 | reads | reads |